Files
zapdb/table/builder.go
T
AngandGitHub 2b4ec9d4a8 fix(docs): fix typos (#2227)
**Description**

Fix typos found via `codespell -S CHANGELOG.md -L
fo,committs,nd,hights,abd,hel,mmaped,siz`

**Checklist**

- [x] Code compiles correctly and linting passes locally
- [ ] For all _code_ changes, an entry added to the `CHANGELOG.md` file
describing and linking to
      this PR
- [ ] Tests added for new functionality, or regression tests for bug
fixes added as applicable
- [ ] For public APIs, new features, etc., PR on [docs
repo](https://github.com/hypermodeinc/docs) staged and linked here
2025-12-11 14:40:19 -05:00

589 lines
18 KiB
Go

/*
* SPDX-FileCopyrightText: © 2017-2025 Istari Digital, Inc.
* SPDX-License-Identifier: Apache-2.0
*/
package table
import (
"crypto/aes"
"errors"
"math"
"runtime"
"sync"
"sync/atomic"
"unsafe"
fbs "github.com/google/flatbuffers/go"
"github.com/klauspost/compress/s2"
"google.golang.org/protobuf/proto"
"github.com/dgraph-io/badger/v4/fb"
"github.com/dgraph-io/badger/v4/options"
"github.com/dgraph-io/badger/v4/pb"
"github.com/dgraph-io/badger/v4/y"
"github.com/dgraph-io/ristretto/v2/z"
)
const (
KB = 1024
MB = KB * 1024
// When a block is encrypted, it's length increases. We add 256 bytes of padding to
// handle cases when block size increases. This is an approximate number.
padding = 256
)
type header struct {
overlap uint16 // Overlap with base key.
diff uint16 // Length of the diff.
}
const headerSize = uint16(unsafe.Sizeof(header{}))
// Encode encodes the header.
func (h header) Encode() []byte {
var b [4]byte
*(*header)(unsafe.Pointer(&b[0])) = h
return b[:]
}
// Decode decodes the header.
func (h *header) Decode(buf []byte) {
// Copy over data from buf into h. Using *h=unsafe.pointer(...) leads to
// pointer alignment issues. See https://github.com/dgraph-io/badger/issues/1096
// and comment https://github.com/dgraph-io/badger/pull/1097#pullrequestreview-307361714
copy(((*[headerSize]byte)(unsafe.Pointer(h))[:]), buf[:headerSize])
}
// bblock represents a block that is being compressed/encrypted in the background.
type bblock struct {
data []byte
baseKey []byte // Base key for the current block.
entryOffsets []uint32 // Offsets of entries present in current block.
end int // Points to the end offset of the block.
}
// Builder is used in building a table.
type Builder struct {
// Typically tens or hundreds of meg. This is for one single file.
alloc *z.Allocator
curBlock *bblock
compressedSize atomic.Uint32
uncompressedSize atomic.Uint32
lenOffsets uint32
keyHashes []uint32 // Used for building the bloomfilter.
opts *Options
maxVersion uint64
onDiskSize uint32
staleDataSize int
// Used to concurrently compress/encrypt blocks.
wg sync.WaitGroup
blockChan chan *bblock
blockList []*bblock
}
func (b *Builder) allocate(need int) []byte {
bb := b.curBlock
if len(bb.data[bb.end:]) < need {
// We need to reallocate. 1GB is the max size that the allocator can allocate.
// While reallocating, if doubling exceeds that limit, then put the upper bound on it.
sz := 2 * len(bb.data)
if sz > (1 << 30) {
sz = 1 << 30
}
if bb.end+need > sz {
sz = bb.end + need
}
tmp := b.alloc.Allocate(sz)
copy(tmp, bb.data)
bb.data = tmp
}
bb.end += need
return bb.data[bb.end-need : bb.end]
}
// append appends to curBlock.data
func (b *Builder) append(data []byte) {
dst := b.allocate(len(data))
y.AssertTrue(len(data) == copy(dst, data))
}
const maxAllocatorInitialSz = 256 << 20
// NewTableBuilder makes a new TableBuilder.
func NewTableBuilder(opts Options) *Builder {
sz := 2 * int(opts.TableSize)
if sz > maxAllocatorInitialSz {
sz = maxAllocatorInitialSz
}
b := &Builder{
alloc: opts.AllocPool.Get(sz, "TableBuilder"),
opts: &opts,
}
b.alloc.Tag = "Builder"
b.curBlock = &bblock{
data: b.alloc.Allocate(opts.BlockSize + padding),
}
b.opts.tableCapacity = uint64(float64(b.opts.TableSize) * 0.95)
// If encryption or compression is not enabled, do not start compression/encryption goroutines
// and write directly to the buffer.
if b.opts.Compression == options.None && b.opts.DataKey == nil {
return b
}
count := 2 * runtime.NumCPU()
b.blockChan = make(chan *bblock, count*2)
b.wg.Add(count)
for i := 0; i < count; i++ {
go b.handleBlock()
}
return b
}
func maxEncodedLen(ctype options.CompressionType, sz int) int {
switch ctype {
case options.Snappy:
return s2.MaxEncodedLen(sz)
case options.ZSTD:
return y.ZSTDCompressBound(sz)
}
return sz
}
func (b *Builder) handleBlock() {
defer b.wg.Done()
doCompress := b.opts.Compression != options.None
for item := range b.blockChan {
// Extract the block.
blockBuf := item.data[:item.end]
// Compress the block.
if doCompress {
out, err := b.compressData(blockBuf)
y.Check(err)
blockBuf = out
}
if b.shouldEncrypt() {
out, err := b.encrypt(blockBuf)
y.Check(y.Wrapf(err, "Error while encrypting block in table builder."))
blockBuf = out
}
// BlockBuf should always less than or equal to allocated space. If the blockBuf is greater
// than allocated space that means the data from this block cannot be stored in its
// existing location.
allocatedSpace := maxEncodedLen(b.opts.Compression, (item.end)) + padding + 1
y.AssertTrue(len(blockBuf) <= allocatedSpace)
// blockBuf was allocated on allocator. So, we don't need to copy it over.
item.data = blockBuf
item.end = len(blockBuf)
b.compressedSize.Add(uint32(len(blockBuf)))
}
}
// Close closes the TableBuilder.
func (b *Builder) Close() {
b.opts.AllocPool.Return(b.alloc)
}
// Empty returns whether it's empty.
func (b *Builder) Empty() bool { return len(b.keyHashes) == 0 }
// keyDiff returns a suffix of newKey that is different from b.baseKey.
func (b *Builder) keyDiff(newKey []byte) []byte {
var i int
for i = 0; i < len(newKey) && i < len(b.curBlock.baseKey); i++ {
if newKey[i] != b.curBlock.baseKey[i] {
break
}
}
return newKey[i:]
}
func (b *Builder) addHelper(key []byte, v y.ValueStruct, vpLen uint32) {
b.keyHashes = append(b.keyHashes, y.Hash(y.ParseKey(key)))
if version := y.ParseTs(key); version > b.maxVersion {
b.maxVersion = version
}
// diffKey stores the difference of key with baseKey.
var diffKey []byte
if len(b.curBlock.baseKey) == 0 {
// Make a copy. Builder should not keep references. Otherwise, caller has to be very careful
// and will have to make copies of keys every time they add to builder, which is even worse.
b.curBlock.baseKey = append(b.curBlock.baseKey[:0], key...)
diffKey = key
} else {
diffKey = b.keyDiff(key)
}
y.AssertTrue(len(key)-len(diffKey) <= math.MaxUint16)
y.AssertTrue(len(diffKey) <= math.MaxUint16)
h := header{
overlap: uint16(len(key) - len(diffKey)),
diff: uint16(len(diffKey)),
}
// store current entry's offset
b.curBlock.entryOffsets = append(b.curBlock.entryOffsets, uint32(b.curBlock.end))
// Layout: header, diffKey, value.
b.append(h.Encode())
b.append(diffKey)
dst := b.allocate(int(v.EncodedSize()))
v.Encode(dst)
// Add the vpLen to the onDisk size. We'll add the size of the block to
// onDisk size in Finish() function.
b.onDiskSize += vpLen
}
/*
Structure of Block.
+-------------------+---------------------+--------------------+--------------+------------------+
| Entry1 | Entry2 | Entry3 | Entry4 | Entry5 |
+-------------------+---------------------+--------------------+--------------+------------------+
| Entry6 | ... | ... | ... | EntryN |
+-------------------+---------------------+--------------------+--------------+------------------+
| Block Meta(contains list of offsets used| Block Meta Size | Block | Checksum Size |
| to perform binary search in the block) | (4 Bytes) | Checksum | (4 Bytes) |
+-----------------------------------------+--------------------+--------------+------------------+
*/
// In case the data is encrypted, the "IV" is added to the end of the block.
func (b *Builder) finishBlock() {
if len(b.curBlock.entryOffsets) == 0 {
return
}
// Append the entryOffsets and its length.
b.append(y.U32SliceToBytes(b.curBlock.entryOffsets))
b.append(y.U32ToBytes(uint32(len(b.curBlock.entryOffsets))))
checksum := b.calculateChecksum(b.curBlock.data[:b.curBlock.end])
// Append the block checksum and its length.
b.append(checksum)
b.append(y.U32ToBytes(uint32(len(checksum))))
b.blockList = append(b.blockList, b.curBlock)
b.uncompressedSize.Add(uint32(b.curBlock.end))
// Add length of baseKey (rounded to next multiple of 4 because of alignment).
// Add another 40 Bytes, these additional 40 bytes consists of
// 12 bytes of metadata of flatbuffer
// 8 bytes for Key in flat buffer
// 8 bytes for offset
// 8 bytes for the len
// 4 bytes for the size of slice while SliceAllocate
b.lenOffsets += uint32(int(math.Ceil(float64(len(b.curBlock.baseKey))/4))*4) + 40
// If compression/encryption is enabled, we need to send the block to the blockChan.
if b.blockChan != nil {
b.blockChan <- b.curBlock
}
}
func (b *Builder) shouldFinishBlock(key []byte, value y.ValueStruct) bool {
// If there is no entry till now, we will return false.
if len(b.curBlock.entryOffsets) <= 0 {
return false
}
// Integer overflow check for statements below.
y.AssertTrue((uint32(len(b.curBlock.entryOffsets))+1)*4+4+8+4 < math.MaxUint32)
// We should include current entry also in size, that's why +1 to len(b.entryOffsets).
entriesOffsetsSize := uint32((len(b.curBlock.entryOffsets)+1)*4 +
4 + // size of list
8 + // Sum64 in checksum proto
4) // checksum length
estimatedSize := uint32(b.curBlock.end) + uint32(6 /*header size for entry*/) +
uint32(len(key)) + value.EncodedSize() + entriesOffsetsSize
if b.shouldEncrypt() {
// IV is added at the end of the block, while encrypting.
// So, size of IV is added to estimatedSize.
estimatedSize += aes.BlockSize
}
// Integer overflow check for table size.
y.AssertTrue(uint64(b.curBlock.end)+uint64(estimatedSize) < math.MaxUint32)
return estimatedSize > uint32(b.opts.BlockSize)
}
// AddStaleKey is same is Add function but it also increments the internal
// staleDataSize counter. This value will be used to prioritize this table for
// compaction.
func (b *Builder) AddStaleKey(key []byte, v y.ValueStruct, valueLen uint32) {
// Rough estimate based on how much space it will occupy in the SST.
b.staleDataSize += len(key) + len(v.Value) + 4 /* entry offset */ + 4 /* header size */
b.addInternal(key, v, valueLen, true)
}
// Add adds a key-value pair to the block.
func (b *Builder) Add(key []byte, value y.ValueStruct, valueLen uint32) {
b.addInternal(key, value, valueLen, false)
}
func (b *Builder) addInternal(key []byte, value y.ValueStruct, valueLen uint32, isStale bool) {
if b.shouldFinishBlock(key, value) {
if isStale {
// This key will be added to tableIndex and it is stale.
b.staleDataSize += len(key) + 4 /* len */ + 4 /* offset */
}
b.finishBlock()
// Create a new block and start writing.
b.curBlock = &bblock{
data: b.alloc.Allocate(b.opts.BlockSize + padding),
}
}
b.addHelper(key, value, valueLen)
}
// TODO: vvv this was the comment on ReachedCapacity.
// FinalSize returns the *rough* final size of the array, counting the header which is
// not yet written.
// TODO: Look into why there is a discrepancy. I suspect it is because of Write(empty, empty)
// at the end. The diff can vary.
// ReachedCapacity returns true if we... roughly (?) reached capacity?
func (b *Builder) ReachedCapacity() bool {
// If encryption/compression is enabled then use the compressed size.
sumBlockSizes := b.compressedSize.Load()
if b.opts.Compression == options.None && b.opts.DataKey == nil {
sumBlockSizes = b.uncompressedSize.Load()
}
blocksSize := sumBlockSizes + // actual length of current buffer
uint32(len(b.curBlock.entryOffsets)*4) + // all entry offsets size
4 + // count of all entry offsets
8 + // checksum bytes
4 // checksum length
estimateSz := blocksSize +
4 + // Index length
b.lenOffsets
return uint64(estimateSz) > b.opts.tableCapacity
}
// Finish finishes the table by appending the index.
/*
The table structure looks like
+---------+------------+-----------+---------------+
| Block 1 | Block 2 | Block 3 | Block 4 |
+---------+------------+-----------+---------------+
| Block 5 | Block 6 | Block ... | Block N |
+---------+------------+-----------+---------------+
| Index | Index Size | Checksum | Checksum Size |
+---------+------------+-----------+---------------+
*/
// In case the data is encrypted, the "IV" is added to the end of the index.
func (b *Builder) Finish() []byte {
bd := b.Done()
buf := make([]byte, bd.Size)
written := bd.Copy(buf)
y.AssertTrue(written == len(buf))
return buf
}
type buildData struct {
blockList []*bblock
index []byte
checksum []byte
Size int
alloc *z.Allocator
}
func (bd *buildData) Copy(dst []byte) int {
var written int
for _, bl := range bd.blockList {
written += copy(dst[written:], bl.data[:bl.end])
}
written += copy(dst[written:], bd.index)
written += copy(dst[written:], y.U32ToBytes(uint32(len(bd.index))))
written += copy(dst[written:], bd.checksum)
written += copy(dst[written:], y.U32ToBytes(uint32(len(bd.checksum))))
return written
}
func (b *Builder) Done() buildData {
b.finishBlock() // This will never start a new block.
if b.blockChan != nil {
close(b.blockChan)
}
// Wait for block handler to finish.
b.wg.Wait()
if len(b.blockList) == 0 {
return buildData{}
}
bd := buildData{
blockList: b.blockList,
alloc: b.alloc,
}
var f y.Filter
if b.opts.BloomFalsePositive > 0 {
bits := y.BloomBitsPerKey(len(b.keyHashes), b.opts.BloomFalsePositive)
f = y.NewFilter(b.keyHashes, bits)
}
index, dataSize := b.buildIndex(f)
var err error
if b.shouldEncrypt() {
index, err = b.encrypt(index)
y.Check(err)
}
checksum := b.calculateChecksum(index)
bd.index = index
bd.checksum = checksum
bd.Size = int(dataSize) + len(index) + len(checksum) + 4 + 4
return bd
}
func (b *Builder) calculateChecksum(data []byte) []byte {
// Build checksum for the index.
checksum := pb.Checksum{
// TODO: The checksum type should be configurable from the
// options.
// We chose to use CRC32 as the default option because
// it performed better compared to xxHash64.
// See the BenchmarkChecksum in table_test.go file
// Size => 1024 B 2048 B
// CRC32 => 63.7 ns/op 112 ns/op
// xxHash64 => 87.5 ns/op 158 ns/op
Sum: y.CalculateChecksum(data, pb.Checksum_CRC32C),
Algo: pb.Checksum_CRC32C,
}
// Write checksum to the file.
chksum, err := proto.Marshal(&checksum)
y.Check(err)
// Write checksum size.
return chksum
}
// DataKey returns datakey of the builder.
func (b *Builder) DataKey() *pb.DataKey {
return b.opts.DataKey
}
func (b *Builder) Opts() *Options {
return b.opts
}
// encrypt will encrypt the given data and appends IV to the end of the encrypted data.
// This should be only called only after checking shouldEncrypt method.
func (b *Builder) encrypt(data []byte) ([]byte, error) {
iv, err := y.GenerateIV()
if err != nil {
return data, y.Wrapf(err, "Error while generating IV in Builder.encrypt")
}
needSz := len(data) + len(iv)
dst := b.alloc.Allocate(needSz)
if err = y.XORBlock(dst[:len(data)], data, b.DataKey().Data, iv); err != nil {
return data, y.Wrapf(err, "Error while encrypting in Builder.encrypt")
}
y.AssertTrue(len(iv) == copy(dst[len(data):], iv))
return dst, nil
}
// shouldEncrypt tells us whether to encrypt the data or not.
// We encrypt only if the data key exist. Otherwise, not.
func (b *Builder) shouldEncrypt() bool {
return b.opts.DataKey != nil
}
// compressData compresses the given data.
func (b *Builder) compressData(data []byte) ([]byte, error) {
switch b.opts.Compression {
case options.None:
return data, nil
case options.Snappy:
sz := s2.MaxEncodedLen(len(data))
dst := b.alloc.Allocate(sz)
return s2.EncodeSnappy(dst, data), nil
case options.ZSTD:
sz := y.ZSTDCompressBound(len(data))
dst := b.alloc.Allocate(sz)
return y.ZSTDCompress(dst, data, b.opts.ZSTDCompressionLevel)
}
return nil, errors.New("Unsupported compression type")
}
func (b *Builder) buildIndex(bloom []byte) ([]byte, uint32) {
builder := fbs.NewBuilder(3 << 20)
boList, dataSize := b.writeBlockOffsets(builder)
// Write block offset vector the the idxBuilder.
fb.TableIndexStartOffsetsVector(builder, len(boList))
// Write individual block offsets in reverse order to work around how Flatbuffers expects it.
for i := len(boList) - 1; i >= 0; i-- {
builder.PrependUOffsetT(boList[i])
}
boEnd := builder.EndVector(len(boList))
var bfoff fbs.UOffsetT
// Write the bloom filter.
if len(bloom) > 0 {
bfoff = builder.CreateByteVector(bloom)
}
b.onDiskSize += dataSize
fb.TableIndexStart(builder)
fb.TableIndexAddOffsets(builder, boEnd)
fb.TableIndexAddBloomFilter(builder, bfoff)
fb.TableIndexAddMaxVersion(builder, b.maxVersion)
fb.TableIndexAddUncompressedSize(builder, b.uncompressedSize.Load())
fb.TableIndexAddKeyCount(builder, uint32(len(b.keyHashes)))
fb.TableIndexAddOnDiskSize(builder, b.onDiskSize)
fb.TableIndexAddStaleDataSize(builder, uint32(b.staleDataSize))
builder.Finish(fb.TableIndexEnd(builder))
buf := builder.FinishedBytes()
index := fb.GetRootAsTableIndex(buf, 0)
// Mutate the ondisk size to include the size of the index as well.
y.AssertTrue(index.MutateOnDiskSize(index.OnDiskSize() + uint32(len(buf))))
return buf, dataSize
}
// writeBlockOffsets writes all the blockOffets in b.offsets and returns the
// offsets for the newly written items.
func (b *Builder) writeBlockOffsets(builder *fbs.Builder) ([]fbs.UOffsetT, uint32) {
var startOffset uint32
var uoffs []fbs.UOffsetT
for _, bl := range b.blockList {
uoff := b.writeBlockOffset(builder, bl, startOffset)
uoffs = append(uoffs, uoff)
startOffset += uint32(bl.end)
}
return uoffs, startOffset
}
// writeBlockOffset writes the given key,offset,len triple to the indexBuilder.
// It returns the offset of the newly written blockoffset.
func (b *Builder) writeBlockOffset(
builder *fbs.Builder, bl *bblock, startOffset uint32) fbs.UOffsetT {
// Write the key to the buffer.
k := builder.CreateByteVector(bl.baseKey)
// Build the blockOffset.
fb.BlockOffsetStart(builder)
fb.BlockOffsetAddKey(builder, k)
fb.BlockOffsetAddOffset(builder, startOffset)
fb.BlockOffsetAddLen(builder, uint32(bl.end))
return fb.BlockOffsetEnd(builder)
}